Almac optimised workflow for Illumina TruSeq® RNA Exome Panel
For research use only. A fully comprehensive RNA panel for biomarker discovery and translational research.
Read the White Paper
Current RNA panel solution – RUO
Almac Diagnostic Services has a proven ability to discover, develop and validate high quality, innovative RNA-based biomarkers with an extensive track record in establishing assays across key regulatory standards. We are offering the optimised RNA Exome Panel initially as Research Use Only (RUO) – not for use in Diagnostic procedures.
claraT – unique gene expression report
The claraT report is a unique software-driven solution, classifying biologically relevant gene expression signatures into a comprehensive, easy-to-interpret report.
Offered as a cost-effective reporting solution from samples processed using the Almac optimised RNA Exome Panel. Helping you to maximise the understanding of your data set, whilst saving valuable research time.
Compatible with both Single RNA and Dual RNA/DNA extraction protocols
Almac offer both high quality single RNA extractions and a dual RNA/DNA extraction protocol (recommended kits both Qiagen) for the optimised RNA Exome biomarker discovery offering. Dual extraction facilitates simultaneous generation of RNA Exome data and WES data from a single sample, therefore conserving valuable sample material.
Find out more on our Whole Exome Sequencing Service.
The Almac RNA Exome Panel is an optimised Next Generation Sequencing (NGS) solution built on the Illumina TruSeq® RNA Exome chemistry and run on the NextSeq500, NextSeq550 and NovaSeq6000 that detects RNA gene expression from solid tumour samples.
The platform covers approximately 99% of the RefSeq Exome with sequencing data and easily interpretable gene expression matrices for use in biomarker discovery and translational research across multiple disease indications.
Data analysis and reporting is performed using an Almac customised bioinformatics pipeline implemented on DNAnexus, a global leader in biomedical informatics and data management. DNAnexus is a cloud-based NGS solution which ensures scalability and security of project data. A significant benefit of utilising DNAnexus within this offering is the flexibility of workflow optimisation and the ability to customise bespoke pipelines for quality control, alignment & expression estimation.
At a Glance
|Metric||RNA Exome Discovery Panel|
|Tissue Type||FFPE (or FF)|
|Recommended Tissue Requirements||1mm³ FFPE Tissue (macrodissected)|
|Recommended Input Requirements||100- 500 ng (dependent on sample quality defined by Almac standard QC metrics)|
|Raw Data Provided||Yes- FASTQ and BAM files|
|Bioinformatics Applications||Cloud based RNAseq pipeline delivered via DNAnexus|